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  5. GSVIVT01019325001

GSVIVT01019325001


No description available


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019325001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00260300 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G31760 No alias SWIB/MDM2 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Ceric.18G018500.1 Ceric.18G018500 not classified & original description: pacid=50621767... 0.03 OrthoFinder output from all 47 species
Gb_37604 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g55310.1 LOC_Os03g55310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g10236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10547 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.02 OrthoFinder output from all 47 species
Smo59520 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e025309_P001 Zm00001e025309 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 51 124
No external refs found!