GSVIVT01018728001 (VPS35B)

Aliases : VPS35B

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component

Gene families : OG0003496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003496_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01018728001

Target	Alias	Description	ECC score	Gene Family Method
Als_g17864	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.04	OrthoFinder output from all 47 species
Azfi_s0303.g063777	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.04	OrthoFinder output from all 47 species
Lfl_g08397	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.05	OrthoFinder output from all 47 species
MA_102572g0010	VPS35B	component VPS35 of Retromer protein recycling complex	0.04	OrthoFinder output from all 47 species
Ppi_g04632	VPS35B	component *(VPS35) of Retromer protein recycling complex...	0.02	OrthoFinder output from all 47 species
Smo167991	VPS35B	Vesicle trafficking.endomembrane trafficking.protein...	0.02	OrthoFinder output from all 47 species
Solyc03g033400.4.1	ZIP3, VPS35A,...	component VPS35 of Retromer protein recycling complex	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016482	cytosolic transport	None	Extended
CC	GO:0030906	retromer, cargo-selective complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042147	retrograde transport, endosome to Golgi	IEA	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005378	Vps35	11	746

External Links

No external refs found!