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  5. GSVIVT01018246001

GSVIVT01018246001


No description available


Gene families : OG0004356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018246001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00088150 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g10390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G058800.1 Ceric.11G058800 not classified & original description: pacid=50596365... 0.03 OrthoFinder output from all 47 species
Cre13.g587000 No alias No description available 0.12 OrthoFinder output from all 47 species
Ehy_g03709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g01250.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Ore_g16801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0331.g027258 No alias not classified & original description: CDS=1-1737 0.03 OrthoFinder output from all 47 species
Smo415306 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g090470.3.1 Solyc01g090470 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g10784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025603_P001 Zm00001e025603 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
InterPro domains Description Start Stop
IPR012617 AATF_C 304 379
IPR025160 AATF 90 225
No external refs found!