Aliases : ATHEXP BETA 1.4, ATEXPB2, EXPB2
Description : Putative expansin-B2 OS=Arabidopsis thaliana
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00115760 | ATEXP7, EXPA7,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | OrthoFinder output from all 47 species | |
AT1G26770 | ATEXPA10,... | expansin A10 | 0.04 | OrthoFinder output from all 47 species | |
AT5G56320 | ATEXP14, EXPA14,... | expansin A14 | 0.02 | OrthoFinder output from all 47 species | |
Ceric.26G037600.1 | ATEXPA3, EXP3,... | alpha-class expansin & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g37896 | EXP15, ATEXPA15,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g26026 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g16770.1 | ATEXPA10,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g44108.1 | ATHEXP BETA 1.4,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g01610.1 | ATHEXP BETA 1.4,... | Expansin-B1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g01650.1 | ATHEXP BETA 1.4,... | Expansin-B1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g06000.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g36040.1 | EXP9, EXPA9,... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
Pir_g45904 | ATEXPA10,... | alpha-class expansin & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pp3c13_20360V3.1 | ATEXPA10,... | expansin A9 | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g39288 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06188 | No alias | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g115300.2.1 | ATHEXP ALPHA ... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g115310.1.1 | ATHEXP ALPHA ... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g115890.3.1 | EXP15, ATEXPA15,... | alpha-class expansin | 0.06 | OrthoFinder output from all 47 species | |
Solyc07g049540.2.1 | ATHEXP BETA 1.4,... | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g077330.3.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g077900.3.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g010860.4.1 | ATEXPA3, EXP3,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g008440.3.1 | EXPB3, ATEXPB3,... | beta-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Spa_g48547 | ATEXPA10,... | alpha-class expansin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e000429_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004713_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e004720_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014231_P001 | ATEXPA10,... | Expansin-A13 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e017334_P001 | ATEXPA10,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038997_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004568 | chitinase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |