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  5. GSVIVT01018158001

GSVIVT01018158001


Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein


Gene families : OG0001407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018158001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT5G47480 No alias RGPR-related 0.04 OrthoFinder output from all 47 species
Adi_g020088 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Ala_g03957 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Aob_g12494 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.06 OrthoFinder output from all 47 species
Aop_g05255 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0781.g086689 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Ceric.06G071900.1 Ceric.06G071900 Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Ceric.11G037700.1 Ceric.11G037700 Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.21 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g22532 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g24242 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.08 OrthoFinder output from all 47 species
Dde_g09502 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species
LOC_Os06g01650.1 LOC_Os06g01650 Sar1-GTPase-regulating protein (Sec16) 0.06 OrthoFinder output from all 47 species
Lfl_g04293 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.09 OrthoFinder output from all 47 species
Nbi_g03220 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08909 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.06 OrthoFinder output from all 47 species
Pir_g15145 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011231 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Sam_g24520 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Smo442780 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Smo446951 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc08g007340.3.1 Solyc08g007340 Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species
Solyc08g007360.3.1 Solyc08g007360 Sar1-GTPase-regulating protein (Sec16) 0.08 OrthoFinder output from all 47 species
Tin_g13175 No alias Sar1-GTPase-regulaTing protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e025399_P002 Zm00001e025399 Sar1-GTPase-regulating protein (Sec16) 0.05 OrthoFinder output from all 47 species
Zm00001e029805_P005 Zm00001e029805 Sar1-GTPase-regulating protein (Sec16) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 665 921
IPR024340 Sec16_CCD 480 603
No external refs found!