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  5. GSVIVT01017981001

GSVIVT01017981001 (FdC2)


Aliases : FdC2

Description : Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017981001
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00044800 FdC2,... Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.09 OrthoFinder output from all 47 species
Ala_g05506 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Azfi_s0074.g037536 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Cba_g09037 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Cre07.g334800 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dde_g13573 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ehy_g10832 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Gb_40918 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g45710.1 FdC2, LOC_Os03g45710 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp5g15920.1 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Ore_g45396 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Pnu_g00441 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Spa_g11753 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005218_P001 FdC2, Zm00001e005218 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 100 171
No external refs found!