1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01017822001

GSVIVT01017822001 (MEE32, EMB3004)


Aliases : MEE32, EMB3004

Description : Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017822001

Target Alias Description ECC score Gene Family Method Actions
Als_g16496 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 341 413
IPR001381 DHquinase_I 4 207
IPR013708 Shikimate_DH-bd_N 221 301
No external refs found!