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  5. GSVIVT01017723001

GSVIVT01017723001


Description : Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera


Gene families : OG0002540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017723001
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00225280 TCTP,... Translationally-controlled tumor protein homolog... 0.04 OrthoFinder output from all 47 species
AT3G16640 TCTP translationally controlled tumor protein 0.04 OrthoFinder output from all 47 species
Adi_g053905 TCTP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21661 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g09668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38820 TCTP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53154 TCTP not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g14653 TCTP not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33496.t1 Aspi01Gene33496 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000964 TCTP not classified & original description: CDS=1-306 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000310.45 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g45440 TCTP not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g43900.1 LOC_Os11g43900 Translationally-controlled tumor protein homolog... 0.06 OrthoFinder output from all 47 species
Len_g38315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36691 TCTP not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_724304g0010 No alias Translationally-controlled tumor protein homolog... 0.03 OrthoFinder output from all 47 species
Mp2g26040.1 TCTP Translationally-controlled tumor protein homolog... 0.03 OrthoFinder output from all 47 species
Solyc01g099770.3.1 Solyc01g099770 Translationally-controlled tumor protein homolog... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR018105 Translational_control_tumour_p 1 163
No external refs found!