- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0003966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003966_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01017540001 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00270880 | evm_27.TU.AmTr_v1... | No description available | 0.08 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00270930 | evm_27.TU.AmTr_v1... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00124040 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT5G04680 | No alias | Ankyrin repeat family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G04690 | No alias | Ankyrin repeat family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G04700 | No alias | Ankyrin repeat family protein | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01001537001 | No alias | Protein translocation.endoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003106001 | No alias | No description available | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01003646001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01005252001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010204001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011216001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g068670.3.1 | Solyc02g068670 | Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g041440.4.1 | Solyc05g041440 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g098390.3.1 | Solyc12g098390 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | HCCA |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | HCCA |
| MF | GO:0005230 | extracellular ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
| MF | GO:0008066 | glutamate receptor activity | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0022824 | transmitter-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | HCCA |
| MF | GO:0038023 | signaling receptor activity | IEP | HCCA |
| MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR026961 | PGG_dom | 63 | 175 |
| No external refs found! |