Aliases : ATDEF1, PDF1A
Description : Protein biosynthesis.organelle translation machineries.peptide deformylation.PDF formylmethionine deformylase
Gene families : OG0007852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007852_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01017280001 | |
Cluster | HCCA: Cluster_44 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.36G060200.1 | ATDEF1, PDF1A,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04790 | ATDEF1, PDF1A | formylmethionine deformylase (PDF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g37510.1 | ATDEF1, PDF1A,... | formylmethionine deformylase (PDF) | 0.05 | OrthoFinder output from all 47 species | |
Len_g14823 | ATDEF1, PDF1A | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000710 | ATDEF1, PDF1A | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g015860.3.1 | ATDEF1, PDF1A,... | formylmethionine deformylase (PDF) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e035712_P002 | ATDEF1, PDF1A,... | formylmethionine deformylase (PDF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023635 | Peptide_deformylase | 90 | 255 |
No external refs found! |