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  5. GSVIVT01017064001

GSVIVT01017064001


No description available


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017064001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00054230 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT1G45688 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
AT3G08490 No alias BEST Arabidopsis thaliana protein match is: Late... 0.06 OrthoFinder output from all 47 species
AT3G24605 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G42860 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Aop_g59912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39024.t1 Aspi01Gene39024 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046456 No alias not classified & original description: CDS=162-1187 0.05 OrthoFinder output from all 47 species
Ceric.01G076700.1 Ceric.01G076700 not classified & original description: pacid=50591443... 0.09 OrthoFinder output from all 47 species
Ceric.31G048500.1 Ceric.31G048500 not classified & original description: pacid=50574815... 0.05 OrthoFinder output from all 47 species
Dcu_g25242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.04 OrthoFinder output from all 47 species
Len_g12642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g12850.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g09919 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018396 No alias not classified & original description: CDS=285-692 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020916 No alias not classified & original description: CDS=279-1298 0.03 OrthoFinder output from all 47 species
Sam_g08763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo75450 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g120710.2.1 Solyc03g120710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc04g078750.3.1 Solyc04g078750 microtubule-interacting component CC of cellulose... 0.03 OrthoFinder output from all 47 species
Spa_g24382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007480_P002 Zm00001e007480 microtubule-interacting component CC of cellulose... 0.02 OrthoFinder output from all 47 species
Zm00001e030085_P001 Zm00001e030085 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 184 288
No external refs found!