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  5. GSVIVT01016994001

GSVIVT01016994001 (PDR1, ATPDR1)


Aliases : PDR1, ATPDR1

Description : ABC transporter G family member 29 OS=Arabidopsis thaliana


Gene families : OG0008801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008801_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016994001
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aop_g03592 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43225 PDR4, ATPDR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33686 PDR6, ATPDR6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36593 ABCG40, PDR12,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_268957g0010 ABCG40, PDR12,... ABC transporter G family member 39 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Ore_g38882 PDR4, ATPDR4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48030 PDR6, ATPDR6 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 70 122
No external refs found!