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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01016594001 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00014p00103240 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00092220 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00167p00019840 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G27660 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G31050 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT1G61660 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G20640 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G05170 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G21340 | B70 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G29100 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06761 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g30685 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g37882 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14362 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g21207 | No alias | bHLH-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g05285 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09878 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54673.t1 | Aspi01Gene54673 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33477 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G036000.1 | Ceric.32G036000 | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g37245 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14027 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23407 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017050001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01038142001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06063 | No alias | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_40387 | No alias | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g17680.1 | LOC_Os02g17680 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g41570.2 | LOC_Os04g41570 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g47810.1 | LOC_Os04g47810 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g42180.1 | LOC_Os05g42180 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g28890.1 | LOC_Os07g28890 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g36610 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49434 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10359 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_504223g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g19970.1 | No alias | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g15621 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g32076 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g26048 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g51301 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g00699 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g13014 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g07556 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013074 | No alias | bHLH-type transcription factor & original description: CDS=1-876 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g05050 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16505 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19157 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37009 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo117274 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g079760.3.1 | Solyc02g079760 | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g084880.3.1 | Solyc02g084880 | transcription factor (bHLH) | 0.09 | OrthoFinder output from all 47 species | |
| Solyc03g031450.3.1 | Solyc03g031450 | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc03g120530.3.1 | Solyc03g120530 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g066580.4.1 | Solyc06g066580 | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc07g020960.3.1 | Solyc07g020960 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g063830.3.1 | Solyc07g063830 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15320 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16714 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11193 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g44400 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007719_P001 | Zm00001e007719 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010350_P001 | Zm00001e010350 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e016395_P001 | Zm00001e016395 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027157_P001 | Zm00001e027157 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032055_P001 | Zm00001e032055 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034854_P002 | Zm00001e034854 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |