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  5. GSVIVT01016540001

GSVIVT01016540001


Description : CASP-like protein 4D1 OS=Ricinus communis


Gene families : OG0011355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016540001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00108110 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G39518 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT2G39530 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
LOC_Os11g34730.1 LOC_Os11g34730 CASP-like protein 4D1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc03g098090.2.1 Solyc03g098090 CASP-like protein 4D1 OS=Ricinus communis... 0.06 OrthoFinder output from all 47 species
Solyc04g011467.1.1 Solyc04g011467 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g011480.3.1 Solyc04g011480 CASP-like protein PIMP1 OS=Capsicum annuum... 0.06 OrthoFinder output from all 47 species
Solyc04g051270.2.1 Solyc04g051270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g006455.1.1 Solyc11g006455 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 6 144
No external refs found!