1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01016317001

GSVIVT01016317001


Description : Elongation factor 1-alpha OS=Oryza sativa subsp. japonica


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016317001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Aev_g32769 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Cba_g03670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27290 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G056100.1 Ceric.06G056100 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Dde_g03883 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Ore_g12703 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g12882 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08467 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Spa_g24426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 39 76
IPR004160 Transl_elong_EFTu/EF1A_C 20 39
No external refs found!