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  5. GSVIVT01016315001

GSVIVT01016315001 (GTE1, GTE01, IMB1)


Aliases : GTE1, GTE01, IMB1

Description : Transcription factor GTE6 OS=Arabidopsis thaliana


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016315001

Target Alias Description ECC score Gene Family Method Actions
AT5G65630 GTE7 global transcription factor group E7 0.04 OrthoFinder output from all 47 species
Aop_g09751 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Gb_30202 GTE8 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
LOC_Os02g15220.2 GTE4, LOC_Os02g15220 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Ore_g28905 BET9, ATBET9 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13117 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e029954_P002 GTE1, GTE01,... transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 85 170
IPR027353 NET_dom 246 307
No external refs found!