1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01015821001

GSVIVT01015821001 (GABA-T, HER1, POP2)


Aliases : GABA-T, HER1, POP2

Description : Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).GABA pyruvate transaminase


Gene families : OG0004682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004682_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015821001

Target Alias Description ECC score Gene Family Method Actions
AT3G22200 GABA-T, HER1, POP2 Pyridoxal phosphate (PLP)-dependent transferases... 0.04 OrthoFinder output from all 47 species
LOC_Os04g52440.1 GABA-T, HER1,... GABA pyruvate transaminase 0.01 OrthoFinder output from all 47 species
Len_g09736 GABA-T, HER1, POP2 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 54 478
No external refs found!