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  5. GSVIVT01015540001

GSVIVT01015540001 (WIN1, SHN1)


Aliases : WIN1, SHN1

Description : Cell wall.cutin and suberin.biosynthesis regulation.SHN-type transcription factor


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015540001
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00133970 ERF72, EBP,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00066390 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00102110 RAP2.11,... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
AMTR_s00069p00132820 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.05 OrthoFinder output from all 47 species
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G25490 DREB1B, ATCBF1, CBF1 C-repeat/DRE binding factor 1 0.08 OrthoFinder output from all 47 species
AT5G51990 CBF4, DREB1D C-repeat-binding factor 4 0.03 OrthoFinder output from all 47 species
Adi_g031493 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g034904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g045252 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g045253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g073952 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g077152 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084219 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g097717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111965 ATERF3, ERF3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116599 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g08073 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ala_g19358 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09909 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Als_g10439 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13579 PUCHI subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g45961 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g46495 Rap2.6L not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33297 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05895 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21431 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g38416 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05319.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07639.t1 Aspi01Gene07639 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15146.t1 Aspi01Gene15146 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28275.t1 Aspi01Gene28275 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene58502.t1 Aspi01Gene58502 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000819 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008013 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014119 ATERF8, ATERF-8, ERF8 not classified & original description: CDS=1-357 0.03 OrthoFinder output from all 47 species
Cba_g28947 RAP2.11 transcription factor *(ERN1) & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.36G047400.1 Ceric.36G047400 not classified & original description: pacid=50568585... 0.03 OrthoFinder output from all 47 species
Dcu_g00633 ORA47 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dcu_g10630 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dcu_g11868 SHN3 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Dcu_g15103 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g19756 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g15670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31465 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00460 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23088 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28249 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 OrthoFinder output from all 47 species
GSVIVT01017542001 No alias Ethylene-responsive transcription factor ERF084... 0.05 OrthoFinder output from all 47 species
GSVIVT01028312001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_02790 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_03645 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Gb_06408 No alias transcription factor (DREB) 0.08 OrthoFinder output from all 47 species
Gb_10809 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.07 OrthoFinder output from all 47 species
Gb_26856 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26857 HRD transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26858 HRD transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26863 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_36619 DEAR3 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Gb_37188 No alias transcription factor (DREB) 0.1 OrthoFinder output from all 47 species
LOC_Os02g45450.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g49010.1 ERF2, ATERF2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g11480.2 RAP2.2, LOC_Os09g11480 Ethylene-responsive transcription factor ERF112... 0.02 OrthoFinder output from all 47 species
LOC_Os12g41060.1 LOC_Os12g41060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12891 ERF2, ATERF2, ATERF-2 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20338 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Len_g55869 RAP2.11 transcription factor *(ERN1) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g04058 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g27912 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Lfl_g31233 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_10491g0010 No alias Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
MA_15000g0010 No alias Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
MA_19420g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_66969g0010 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
Msp_g35751 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14223 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g21499 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Ore_g33731 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37668 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g38776 ERF-1, ATERF-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07555 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g29907 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g37658 ERF5, ATERF-5, ATERF5 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43460 DREB26 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g46475 RRTF1 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06457 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09363 PUCHI subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c10_17870V3.1 Pp3c10_17870 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c16_13260V3.1 Pp3c16_13260 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c1_5010V3.1 Pp3c1_5010 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_810V3.1 Pp3c5_810 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011575 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-717 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0241.g026632 No alias not classified & original description: CDS=67-2787 0.02 OrthoFinder output from all 47 species
Sam_g15417 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Solyc01g090300.2.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g090800.1.1 RAP2.6, Solyc02g090800 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g095973.1.1 ABI4, SAN5,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc03g116610.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Solyc05g050830.3.1 Solyc05g050830 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc06g066540.1.1 TINY2, Solyc06g066540 transcription factor (DREB) 0.09 OrthoFinder output from all 47 species
Spa_g56350 No alias subgroup ERF-III transcription factor & original... 0.08 OrthoFinder output from all 47 species
Tin_g14637 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002358_P001 ERF-6-6, ERF6,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e015429_P001 Zm00001e015429 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e032434_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 41 85
No external refs found!