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  5. GSVIVT01015446001

GSVIVT01015446001


Description : Polyamine metabolism.putrescine.synthesis.cytosolic pathway.ornithine decarboxylase


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015446001

Target Alias Description ECC score Gene Family Method Actions
Adi_g076975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0090.g042654 SAMDC EC_4.1 carbon-carbon lyase & original description: CDS=700-2217 0.05 OrthoFinder output from all 47 species
Gb_37304 No alias ornithine decarboxylase 0.05 OrthoFinder output from all 47 species
Gb_37305 No alias ornithine decarboxylase 0.06 OrthoFinder output from all 47 species
LOC_Os04g04980.1 LOC_Os04g04980 ornithine decarboxylase 0.04 OrthoFinder output from all 47 species
Pnu_g08792 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g098310.1.1 Solyc03g098310 ornithine decarboxylase 0.04 OrthoFinder output from all 47 species
Zm00001e041156_P001 Zm00001e041156 S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 53 152
IPR022644 De-COase2_N 1 51
No external refs found!