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  5. GSVIVT01015262001

GSVIVT01015262001


No description available


Gene families : OG0003275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015262001

Target Alias Description ECC score Gene Family Method Actions
Ala_g10472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62368.t1 AtAGP20, AGP20,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G056000.1 AtAGP20, AGP20,... not classified & original description: pacid=50590279... 0.04 OrthoFinder output from all 47 species
LOC_Os01g46850.1 LOC_Os01g46850 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g39763 AGP41 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59793 AtAGP20, AGP20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_120230g0010 AtAGP20, AGP20 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g09113 AtAGP20, AGP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g095515.1.1 AGP16, ATAGP16,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g03352 AGP41 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009424 AGP16/20/22/41 32 65
No external refs found!