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  5. GSVIVT01015200001

GSVIVT01015200001 (NFC04, MSI4, NFC4,...)


Aliases : NFC04, MSI4, NFC4, ACG1, FVE, ATMSI4

Description : Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1c/MSI component


Gene families : OG0004797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015200001

Target Alias Description ECC score Gene Family Method Actions
AT2G19520 NFC04, MSI4,... Transducin family protein / WD-40 repeat family protein 0.04 OrthoFinder output from all 47 species
Als_g16280 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31637 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g268450 NFC04, MSI4,... Chromatin organisation.histone chaperone activities.CAF1... 0.01 OrthoFinder output from all 47 species
LOC_Os01g51300.1 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.05 OrthoFinder output from all 47 species
Zm00001e028156_P001 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 16 82
IPR001680 WD40_repeat 162 197
IPR001680 WD40_repeat 335 374
IPR001680 WD40_repeat 293 325
IPR001680 WD40_repeat 245 280
No external refs found!