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  5. GSVIVT01014884001

GSVIVT01014884001


Description : S-protein homolog 5 OS=Arabidopsis thaliana


Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014884001
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G04645 No alias Plant self-incompatibility protein S1 family 0.05 OrthoFinder output from all 47 species
AT3G17080 No alias Plant self-incompatibility protein S1 family 0.04 OrthoFinder output from all 47 species
AT4G16195 No alias Plant self-incompatibility protein S1 family 0.04 OrthoFinder output from all 47 species
AT4G24973 No alias Plant self-incompatibility protein S1 family 0.03 OrthoFinder output from all 47 species
AT4G24974 No alias Plant self-incompatibility protein S1 family 0.03 OrthoFinder output from all 47 species
AT4G24975 No alias Plant self-incompatibility protein S1 family 0.05 OrthoFinder output from all 47 species
AT5G12060 No alias Plant self-incompatibility protein S1 family 0.04 OrthoFinder output from all 47 species
AT5G12070 No alias Plant self-incompatibility protein S1 family 0.05 OrthoFinder output from all 47 species
Len_g46817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g15540.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g025660.1.1 Solyc03g025660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g053460.1.1 Solyc05g053460 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g011100.1.1 Solyc09g011100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g091310.1.1 Solyc09g091310 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g091320.1.1 Solyc09g091320 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g091330.1.1 Solyc09g091330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g091340.1.1 Solyc09g091340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g091350.1.1 Solyc09g091350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g071900.1.1 Solyc11g071900 Self-incompatibility protein S1 OS=Papaver rhoeas... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
InterPro domains Description Start Stop
IPR010264 Self-incomp_S1 34 136
No external refs found!