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Description : S-protein homolog 2 OS=Arabidopsis thaliana
Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01014873001 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04645 | No alias | Plant self-incompatibility protein S1 family | 0.05 | OrthoFinder output from all 47 species | |
| AT3G17080 | No alias | Plant self-incompatibility protein S1 family | 0.06 | OrthoFinder output from all 47 species | |
| AT4G16195 | No alias | Plant self-incompatibility protein S1 family | 0.04 | OrthoFinder output from all 47 species | |
| AT4G24973 | No alias | Plant self-incompatibility protein S1 family | 0.03 | OrthoFinder output from all 47 species | |
| AT4G24974 | No alias | Plant self-incompatibility protein S1 family | 0.05 | OrthoFinder output from all 47 species | |
| AT4G24975 | No alias | Plant self-incompatibility protein S1 family | 0.07 | OrthoFinder output from all 47 species | |
| AT5G12060 | No alias | Plant self-incompatibility protein S1 family | 0.06 | OrthoFinder output from all 47 species | |
| AT5G12070 | No alias | Plant self-incompatibility protein S1 family | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g15540.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g025660.1.1 | Solyc03g025660 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g053460.1.1 | Solyc05g053460 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g091310.1.1 | Solyc09g091310 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc09g091320.1.1 | Solyc09g091320 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g091330.1.1 | Solyc09g091330 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g091350.1.1 | Solyc09g091350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g071900.1.1 | Solyc11g071900 | Self-incompatibility protein S1 OS=Papaver rhoeas... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010264 | Self-incomp_S1 | 31 | 134 |
| No external refs found! |