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  5. GSVIVT01014872001

GSVIVT01014872001


Description : S-protein homolog 3 OS=Arabidopsis thaliana


Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014872001
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G04645 No alias Plant self-incompatibility protein S1 family 0.05 OrthoFinder output from all 47 species
AT3G17080 No alias Plant self-incompatibility protein S1 family 0.06 OrthoFinder output from all 47 species
AT4G16195 No alias Plant self-incompatibility protein S1 family 0.03 OrthoFinder output from all 47 species
AT4G24973 No alias Plant self-incompatibility protein S1 family 0.03 OrthoFinder output from all 47 species
AT4G24974 No alias Plant self-incompatibility protein S1 family 0.04 OrthoFinder output from all 47 species
AT4G24975 No alias Plant self-incompatibility protein S1 family 0.06 OrthoFinder output from all 47 species
AT5G12060 No alias Plant self-incompatibility protein S1 family 0.03 OrthoFinder output from all 47 species
Len_g46817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g15540.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pp3c16_19780V3.1 Pp3c16_19780 Plant self-incompatibility protein S1 family 0.02 OrthoFinder output from all 47 species
Pp3c21_830V3.1 Pp3c21_830 Plant self-incompatibility protein S1 family 0.02 OrthoFinder output from all 47 species
Solyc03g025660.1.1 Solyc03g025660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g053460.1.1 Solyc05g053460 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g011100.1.1 Solyc09g011100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g091300.1.1 Solyc09g091300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g091310.1.1 Solyc09g091310 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc09g091320.1.1 Solyc09g091320 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g091330.1.1 Solyc09g091330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g091340.1.1 Solyc09g091340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g091350.1.1 Solyc09g091350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g092370.1.1 Solyc09g092370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g086610.1.1 Solyc10g086610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g071900.1.1 Solyc11g071900 Self-incompatibility protein S1 OS=Papaver rhoeas... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR010264 Self-incomp_S1 35 137
No external refs found!