GSVIVT01014739001 (ABF2, ATAREB1, AREB1)

Aliases : ABF2, ATAREB1, AREB1

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor

Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01014739001

Target	Alias	Description	ECC score	Gene Family Method
AT2G41070	DPBF4, ATBZIP12, EEL	Basic-leucine zipper (bZIP) transcription factor family protein	0.05	OrthoFinder output from all 47 species
AT3G44460	DPBF2, AtbZIP67	Basic-leucine zipper (bZIP) transcription factor family protein	0.14	OrthoFinder output from all 47 species
AT4G34000	DPBF5, ABF3	abscisic acid responsive elements-binding factor 3	0.04	OrthoFinder output from all 47 species
Aev_g10271	AREB2, ABF4	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09795	ABF1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0206.g057820	No alias	not classified & original description: CDS=1-264	0.04	OrthoFinder output from all 47 species
Cba_g06888	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G009600.1	ABF2, ATAREB1,...	bZIP class-A transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g08207	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04657	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009485001	ABF2, ATAREB1, AREB1	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
Gb_05158	DPBF3, AREB3	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
LOC_Os01g64000.1	ABI5, GIA1,...	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Len_g46528	ABF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_28402g0010	DPBF4, ATBZIP12, EEL	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Nbi_g02994	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44055	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26567	No alias	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g009510.2.1	DPBF2, AtbZIP67,...	transcription factor (bZIP)	0.08	OrthoFinder output from all 47 species
Solyc02g061990.3.1	ATBZIP27,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Solyc04g078840.3.1	ABF2, ATAREB1,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Solyc09g009490.4.1	ABI5, GIA1,...	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Solyc10g076920.3.1	DPBF3, AREB3,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Tin_g32460	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019163_P004	GBF4, Zm00001e019163	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Zm00001e022136_P001	ABF2, ATAREB1,...	transcription factor (bZIP)	0.01	OrthoFinder output from all 47 species
Zm00001e028693_P002	ABI5, GIA1,...	transcription factor (bZIP)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
MF	GO:0016157	sucrose synthase activity	IEP	HCCA
BP	GO:0019915	lipid storage	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	181	227

External Links

No external refs found!

GSVIVT01014739001 (ABF2, ATAREB1, AREB1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation