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  5. GSVIVT01014737001

GSVIVT01014737001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014737001
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00183390 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
AT4G26580 No alias RING/U-box superfamily protein 0.25 OrthoFinder output from all 47 species
Adi_g056482 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16812 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21445 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47964 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21889 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01896.t1 Aspi01Gene01896 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31240.t1 Aspi01Gene31240 E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58214.t1 Aspi01Gene58214 E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008139 No alias E3 ubiquitin ligase *(DRR1) & original description: CDS=62-1507 0.03 OrthoFinder output from all 47 species
Cba_g13914 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G047900.1 Ceric.26G047900 not classified & original description: pacid=50599463... 0.04 OrthoFinder output from all 47 species
Dde_g03379 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13156 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_26029 No alias RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
MA_105489g0010 No alias RING-H2-class E3 ligase 0.12 OrthoFinder output from all 47 species
Ppi_g06404 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g065810.2.1 Solyc07g065810 E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g067770.3.1 Solyc08g067770 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc12g015800.2.1 Solyc12g015800 RING-H2-class E3 ligase 0.23 OrthoFinder output from all 47 species
Tin_g13870 No alias E3 ubiquiTin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020043_P002 Zm00001e020043 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 296 338
No external refs found!