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Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01014576001 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00199p00026650 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G27240 | No alias | zinc finger (C2H2 type) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G006400.1 | Ceric.32G006400 | not classified & original description: pacid=50597460... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.39G048600.1 | Ceric.39G048600 | not classified & original description: pacid=50582455... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13818 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008819001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08005 | No alias | C2H2 zinc finger transcription factor. sugar efflux... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25842 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g57650.1 | LOC_Os01g57650 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g15790.1 | LOC_Os03g15790 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g59380.1 | LOC_Os04g59380 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g46910.1 | LOC_Os06g46910 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018625 | No alias | not classified & original description: CDS=1-1434 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g081370.2.1 | Solyc04g081370 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g17139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019606_P002 | Zm00001e019606 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e028937_P001 | Zm00001e028937 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0016597 | amino acid binding | IEP | HCCA |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0031011 | Ino80 complex | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| MF | GO:0043177 | organic acid binding | IEP | HCCA |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
| CC | GO:0097346 | INO80-type complex | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1904949 | ATPase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |