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  5. GSVIVT01014386001

GSVIVT01014386001


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014386001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00269560 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
AMTR_s00009p00267130 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.07 OrthoFinder output from all 47 species
AT3G15450 No alias Aluminium induced protein with YGL and LRDR motifs 0.08 OrthoFinder output from all 47 species
AT5G19140 ATAILP1, AILP1 Aluminium induced protein with YGL and LRDR motifs 0.03 OrthoFinder output from all 47 species
Aev_g12030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0174.g055900 No alias not classified & original description: CDS=333-1163 0.03 OrthoFinder output from all 47 species
Ceric.04G004200.1 ATAILP1, AILP1,... not classified & original description: pacid=50630154... 0.06 OrthoFinder output from all 47 species
Ceric.04G004300.1 Ceric.04G004300 not classified & original description: pacid=50631114... 0.06 OrthoFinder output from all 47 species
Ceric.37G070600.1 Ceric.37G070600 not classified & original description: pacid=50615522... 0.06 OrthoFinder output from all 47 species
Cre16.g680700 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01023575001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g53270.1 LOC_Os03g53270 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58280.2 LOC_Os04g58280 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
MA_10434639g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
MA_12061g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
MA_20406g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Mp7g03680.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Pir_g05147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo227818 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Solyc12g013700.2.1 Solyc12g013700 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Spa_g46909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005643_P001 Zm00001e005643 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 2 230
No external refs found!