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  5. GSVIVT01013627001

GSVIVT01013627001


Description : Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component


Gene families : OG0006416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006416_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013627001

Target Alias Description ECC score Gene Family Method Actions
Adi_g055304 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Aev_g44598 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Aob_g10925 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.02 OrthoFinder output from all 47 species
Ceric.1Z286500.1 Ceric.1Z286500 not classified & original description: pacid=50637237... 0.06 OrthoFinder output from all 47 species
Cre17.g709400 No alias Vesicle trafficking.target membrane... 0.02 OrthoFinder output from all 47 species
Dcu_g12676 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.05 OrthoFinder output from all 47 species
Len_g08857 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.02 OrthoFinder output from all 47 species
Lfl_g10679 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
MA_1271g0010 No alias CORVET-specific component VPS3 of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
Msp_g14567 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017384 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Solyc05g015210.4.1 Solyc05g015210 CORVET-specific component VPS3 of HOPS/CORVET membrane... 0.07 OrthoFinder output from all 47 species
Tin_g13636 No alias CORVET-specific component *(VPS3) of HOPS/CORVET... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR019452 VPS39/TGF_beta_rcpt-assoc_1 558 678
IPR000547 Clathrin_H-chain/VPS_repeat 701 864
IPR001180 CNH_dom 91 353
IPR019453 VPS39/TGF_beta_rcpt-assoc_2 877 984
No external refs found!