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  5. GSVIVT01013454001

GSVIVT01013454001


Description : Cell wall.pectin.rhamnogalacturonan I.synthesis.beta-1,4-galactosyltransferase


Gene families : OG0000987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013454001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00116470 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan... 0.03 OrthoFinder output from all 47 species
AT2G33570 No alias Domain of unknown function (DUF23) 0.09 OrthoFinder output from all 47 species
AT3G60990 No alias Domain of unknown function (DUF23) 0.04 OrthoFinder output from all 47 species
AT5G48190 No alias Domain of unknown function (DUF23) 0.04 OrthoFinder output from all 47 species
Aev_g15191 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Ala_g08514 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Als_g07959 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.06 OrthoFinder output from all 47 species
Als_g15211 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Aob_g01928 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Aob_g16965 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene01612.t1 Aspi01Gene01612 beta-1,4-galactosyltransferase *(GALS) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene38324.t1 Aspi01Gene38324 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037706 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G084100.1 Ceric.13G084100 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G026200.1 Ceric.31G026200 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Dac_g35676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14766 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g41184 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g46750 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Dde_g14372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31761 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g23369 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01010061001 No alias Cell wall.pectin.rhamnogalacturonan... 0.05 OrthoFinder output from all 47 species
Gb_35535 No alias beta-1,4-galactosyltransferase 0.02 OrthoFinder output from all 47 species
LOC_Os06g22330.1 LOC_Os06g22330 beta-1,4-galactosyltransferase 0.04 OrthoFinder output from all 47 species
LOC_Os06g41910.1 LOC_Os06g41910 beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Len_g35415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g42556 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
MA_10433350g0010 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
MA_10433350g0020 No alias Galactan beta-1,4-galactosyltransferase GALS1... 0.04 OrthoFinder output from all 47 species
MA_630451g0010 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
MA_898638g0010 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
MA_99230g0010 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Mp4g09490.1 No alias beta-1,4-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Nbi_g09364 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g16035 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g26113 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g62179 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Sam_g43928 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g005200.3.1 Solyc10g005200 beta-1,4-galactosyltransferase 0.11 OrthoFinder output from all 47 species
Tin_g23937 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e031030_P001 Zm00001e031030 beta-1,4-galactosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 209 429
No external refs found!