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  5. GSVIVT01013395001

GSVIVT01013395001 (PUB44, SAUL1, ATPUB44)


Aliases : PUB44, SAUL1, ATPUB44

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013395001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00256300 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00145170 PUB44, SAUL1,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G68940 No alias Armadillo/beta-catenin-like repeat family protein 0.06 OrthoFinder output from all 47 species
Als_g09496 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33358.t1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05316 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G046500.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.03G047200.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.14G057700.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.07 OrthoFinder output from all 47 species
Ehy_g06205 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001115001 PUB8, B80 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01010123001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_20043 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Gb_23646 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g45420.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
LOC_Os06g16410.1 LOC_Os06g16410 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g17880.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g17900.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.07 OrthoFinder output from all 47 species
Lfl_g03427 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28889 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022376 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=244-2682 0.03 OrthoFinder output from all 47 species
Sam_g16188 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo165881 PUB44, SAUL1, ATPUB44 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo82283 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc04g082570.3.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Spa_g18098 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02165 No alias E3 ubiquiTin ligase *(SAUL) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g07747 PUB44, SAUL1, ATPUB44 E3 ubiquiTin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g42066 PUB44, SAUL1, ATPUB44 E3 ubiquiTin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023512_P001 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Zm00001e036817_P002 Zm00001e036817 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Zm00001e039535_P001 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 31 105
No external refs found!