GSVIVT01013307001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01013307001
Cluster	HCCA: Cluster_343

Target	Alias	Description	ECC score	Gene Family Method
AT3G14470	No alias	NB-ARC domain-containing disease resistance protein	0.02	OrthoFinder output from all 47 species
GSVIVT01000634001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.06	OrthoFinder output from all 47 species
GSVIVT01000635001	No alias	Putative disease resistance RPP13-like protein 1...	0.17	OrthoFinder output from all 47 species
GSVIVT01000656001	HRT, RCY1, RPP8	Putative disease resistance protein At3g14460...	0.11	OrthoFinder output from all 47 species
GSVIVT01000663001	No alias	Putative disease resistance protein At3g14460...	0.33	OrthoFinder output from all 47 species
GSVIVT01000666001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.05	OrthoFinder output from all 47 species
GSVIVT01000840001	No alias	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum	0.04	OrthoFinder output from all 47 species
GSVIVT01001382001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01001446001	No alias	Putative disease resistance RPP13-like protein 1...	0.2	OrthoFinder output from all 47 species
GSVIVT01001457001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01001473001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01004013001	No alias	Putative disease resistance protein At3g14460...	0.05	OrthoFinder output from all 47 species
GSVIVT01004064001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01005316001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01006243001	No alias	Putative disease resistance protein At3g14460...	0.04	OrthoFinder output from all 47 species
GSVIVT01007029001	No alias	Putative disease resistance RPP13-like protein 1...	0.11	OrthoFinder output from all 47 species
GSVIVT01009146001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01010700001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01012436001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01013512001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.12	OrthoFinder output from all 47 species
GSVIVT01013535001	No alias	Putative disease resistance RPP13-like protein 1...	0.09	OrthoFinder output from all 47 species
GSVIVT01022835001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01022837001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01022851001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01022856001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01022859001	No alias	Putative disease resistance protein At3g14460...	0.11	OrthoFinder output from all 47 species
GSVIVT01022931001	No alias	Putative disease resistance RPP13-like protein 1...	0.09	OrthoFinder output from all 47 species
GSVIVT01022941001	No alias	Putative disease resistance RPP13-like protein 1...	0.2	OrthoFinder output from all 47 species
GSVIVT01022947001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01022963001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01023011001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01023015001	No alias	Putative disease resistance RPP13-like protein 1...	0.09	OrthoFinder output from all 47 species
GSVIVT01027229001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
GSVIVT01027270001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01027276001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01031535001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01032169001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01032171001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01032189001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01032199001	No alias	Disease resistance protein RGA2 OS=Solanum bulbocastanum	0.03	OrthoFinder output from all 47 species
GSVIVT01034675001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
GSVIVT01036610001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01036628001	RPM1, RPS3	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01036657001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
GSVIVT01036767001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01037447001	No alias	Putative disease resistance protein At3g14460...	0.05	OrthoFinder output from all 47 species
LOC_Os01g71114.1	LOC_Os01g71114	Putative disease resistance protein RGA4 OS=Solanum...	0.07	OrthoFinder output from all 47 species
LOC_Os04g43340.1	LOC_Os04g43340	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
LOC_Os05g34220.1	LOC_Os05g34220	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
LOC_Os05g41290.1	LOC_Os05g41290	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.03	OrthoFinder output from all 47 species
LOC_Os07g17250.1	LOC_Os07g17250	Putative disease resistance protein At3g14460...	0.02	OrthoFinder output from all 47 species
LOC_Os08g42930.1	LOC_Os08g42930	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.02	OrthoFinder output from all 47 species
LOC_Os08g43000.1	LOC_Os08g43000	Putative disease resistance protein RGA3 OS=Solanum...	0.02	OrthoFinder output from all 47 species
LOC_Os08g43050.1	LOC_Os08g43050	Putative disease resistance protein RGA1 OS=Solanum...	0.03	OrthoFinder output from all 47 species
LOC_Os11g29110.1	LOC_Os11g29110	Putative disease resistance protein RGA4 OS=Solanum...	0.03	OrthoFinder output from all 47 species
Solyc02g030280.2.1	Solyc02g030280	Putative disease resistance protein RGA4 OS=Solanum...	0.02	OrthoFinder output from all 47 species
Solyc03g078300.3.1	Solyc03g078300	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
Solyc08g007630.1.1	Solyc08g007630	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	152	373

External Links

No external refs found!

GSVIVT01013307001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation