1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01013191001

GSVIVT01013191001 (FdC1)


Aliases : FdC1

Description : Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007770_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013191001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00150380 FdC1,... Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
AT1G32550 FdC1 2Fe-2S ferredoxin-like superfamily protein 0.21 OrthoFinder output from all 47 species
Adi_g043788 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Ala_g06893 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Als_g17790 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Aob_g00791 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Aspi01Gene42540.t1 FdC1, Aspi01Gene42540 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Cba_g16391 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Cba_g20079 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Ceric.13G044700.1 FdC1, Ceric.13G044700 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Cre03.g183850 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g00249 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00557 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ehy_g02045 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
LOC_Os03g48040.1 FdC1, LOC_Os03g48040 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.17 OrthoFinder output from all 47 species
Mp2g18370.1 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Nbi_g14134 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ore_g04929 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pir_g10671 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pnu_g00351 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ppi_g18540 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009549 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Sam_g25831 No alias ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Solyc08g077050.3.1 FdC1, Solyc08g077050 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g00162 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Zm00001e012273_P001 FdC1, Zm00001e012273 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 79 144
No external refs found!