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  5. GSVIVT01012985001

GSVIVT01012985001


Description : Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana


Gene families : OG0001155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012985001
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT1G03550 No alias Secretory carrier membrane protein (SCAMP) family protein 0.02 OrthoFinder output from all 47 species
Adi_g108854 SC3 regulatory protein *(SCAMP) of exocytic trafficking &... 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049139 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Dac_g10505 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.02 OrthoFinder output from all 47 species
Ehy_g00806 SC3 regulatory protein *(SCAMP) of exocytic trafficking &... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06440.1 LOC_Os08g06440 Secretory carrier-associated membrane protein 6 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Len_g01653 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.02 OrthoFinder output from all 47 species
Lfl_g02844 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Nbi_g05251 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019510 SC3 regulatory protein *(SCAMP) of exocytic trafficking &... 0.04 OrthoFinder output from all 47 species
Sam_g19074 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.02 OrthoFinder output from all 47 species
Zm00001e032063_P002 Zm00001e032063 Secretory carrier-associated membrane protein 3 OS=Oryza... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR007273 SCAMP 97 267
No external refs found!