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  5. GSVIVT01012613001

GSVIVT01012613001 (NDHH)


Aliases : NDHH

Description : NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Vitis vinifera


Gene families : OG0001958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012613001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00081000 NDHH,... NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.05 OrthoFinder output from all 47 species
AMTR_s00456p00012010 NDHH,... NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.05 OrthoFinder output from all 47 species
ATCG01110 NDHH NAD(P)H dehydrogenase subunit H 0.12 OrthoFinder output from all 47 species
Aev_g39466 NDHH component *(NdhH) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Aob_g03341 NDHH component *(NdhH) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G044500.1 NDHH, Ceric.05G044500 component *(NdhH) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ceric.09G049100.1 NDHH, Ceric.09G049100 component *(NdhH) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G010000.1 NDHH, Ceric.19G010000 component *(NdhH) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z020400.1 NDHH, Ceric.1Z020400 not classified & original description: pacid=50586380... 0.03 OrthoFinder output from all 47 species
Dde_g05363 NDHH component *(NdhH) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Gb_26226 NDHH component NdhH of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
LOC_Os04g16732.1 NDHH, LOC_Os04g16732 component NdhH of NDH subcomplex A 0.12 OrthoFinder output from all 47 species
LOC_Os07g41300.1 NDHH, LOC_Os07g41300 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.11 OrthoFinder output from all 47 species
Lfl_g01369 NDHH component *(NdhH) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Mp2g04290.1 No alias NADH dehydrogenase [ubiquinone] iron-sulfur protein 2... 0.03 OrthoFinder output from all 47 species
Mp2g04300.1 No alias NADH dehydrogenase [ubiquinone] iron-sulfur protein 2... 0.03 OrthoFinder output from all 47 species
Mp5g10290.1 NDHH NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g00620 NDHH component *(NdhH) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Pir_g13455 NDHH component *(NdhH) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Pir_g66477 NAD7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc00g500087.1.1 NDHH, Solyc00g500087 component NdhH of NDH subcomplex A 0.07 OrthoFinder output from all 47 species
Solyc00g500124.1.1 NDHH, Solyc00g500124 component NdhH of NDH subcomplex A 0.07 OrthoFinder output from all 47 species
Solyc00g500192.1.1 NDHH, Solyc00g500192 component NdhH of NDH subcomplex A 0.07 OrthoFinder output from all 47 species
Solyc09g031573.1.1 Solyc09g031573 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g047400.1.1 NDHH, Solyc10g047400 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001135 NADH_Q_OxRdtase_suD 49 214
IPR001694 NADH_UbQ_OxRdtase_su1/FPO 290 437
No external refs found!