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  5. GSVIVT01012246001

GSVIVT01012246001 (CRC)


Aliases : CRC

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.YABBY transcription factor


Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012246001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 YAB2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00047p00199030 CRC,... RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
AMTR_s00085p00032940 AFO, YAB1, FIL,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.11 OrthoFinder output from all 47 species
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.05 OrthoFinder output from all 47 species
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.04 OrthoFinder output from all 47 species
AT4G00180 YAB3 Plant-specific transcription factor YABBY family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01037533001 YAB2 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_22423 YAB5 transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
LOC_Os04g45330.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
LOC_Os07g06620.2 YAB2, LOC_Os07g06620 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
LOC_Os10g36420.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
LOC_Os12g42610.1 YAB5, LOC_Os12g42610 transcription factor (YABBY) 0.07 OrthoFinder output from all 47 species
MA_407206g0010 YAB5 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Solyc01g010240.3.1 CRC, Solyc01g010240 transcription factor (YABBY) 0.09 OrthoFinder output from all 47 species
Solyc01g091010.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Solyc05g005240.2.1 INO, Solyc05g005240 transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Solyc06g073920.3.1 YAB2, Solyc06g073920 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Solyc08g079100.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Solyc11g071810.2.1 YAB2, Solyc11g071810 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e000845_P005 CRC, Zm00001e000845 transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
Zm00001e003268_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e007412_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e012387_P001 YAB5, Zm00001e012387 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Zm00001e012388_P001 YAB5, Zm00001e012388 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Zm00001e012577_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Zm00001e017951_P002 YAB5, Zm00001e017951 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Zm00001e032845_P002 YAB2, Zm00001e032845 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e038717_P002 CRC, Zm00001e038717 transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Zm00001e041322_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006780 YABBY 6 144
No external refs found!