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  5. GSVIVT01011904001

GSVIVT01011904001 (ATXYL1, XYL1, TRG1)


Aliases : ATXYL1, XYL1, TRG1

Description : Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011904001
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.05 OrthoFinder output from all 47 species
AT1G68560 ATXYL1, XYL1, TRG1 alpha-xylosidase 1 0.03 OrthoFinder output from all 47 species
Als_g29422 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37687 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31219.t1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01073 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species
Gb_06380 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.05 OrthoFinder output from all 47 species
Lfl_g16219 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38030 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g10230.1 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
Zm00001e017022_P001 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 269 737
IPR031727 Gal_mutarotase_N 48 177
IPR025887 Glyco_hydro_31_N_dom 180 246
No external refs found!