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Aliases : NUP155
Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin
Gene families : OG0004159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004159_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00060p00130340 | NUP155,... | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G14850 | NUP155 | nucleoporin 155 | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g057726 | NUP155 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08015 | NUP155 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g01209 | NUP155 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13988 | NUP155 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G038900.1 | NUP155, Ceric.28G038900 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre09.g394350 | NUP155 | Protein translocation.nucleus.nucleocytoplasmic... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g51868 | NUP155 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g13741 | NUP155 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_24664 | NUP155 | NUP155 scaffold nucleoporin of nuclear pore complex | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os06g20090.1 | NUP155, LOC_Os06g20090 | NUP155 scaffold nucleoporin of nuclear pore complex | 0.09 | OrthoFinder output from all 47 species | |
| Mp6g03580.1 | NUP155 | NUP155 scaffold nucleoporin of nuclear pore complex | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g37203 | NUP155 | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52348 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP155) &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g008160.3.1 | NUP155, Solyc07g008160 | NUP155 scaffold nucleoporin of nuclear pore complex | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e000883_P002 | NUP155, Zm00001e000883 | NUP155 scaffold nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e038690_P002 | NUP155, Zm00001e038690 | NUP155 scaffold nucleoporin of nuclear pore complex | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014908 | Nucleoporin_Nup133/Nup155_N | 54 | 361 |
| No external refs found! |