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  5. GSVIVT01011465001

GSVIVT01011465001 (RAP2.11)


Aliases : RAP2.11

Description : External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.ERN1 transcription factor


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011465001

Target Alias Description ECC score Gene Family Method Actions
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G19790 RAP2.11 related to AP2 11 0.01 OrthoFinder output from all 47 species
AT5G25190 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g010029 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060280 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aev_g00845 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g05911 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g07749 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ala_g09848 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g04727 HRE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10573 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g36600 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g37382 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g10291 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g18744 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g62041 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05678.t1 Aspi01Gene05678 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07639.t1 Aspi01Gene07639 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08500.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18350.t1 RAP2.12, Aspi01Gene18350 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene44272.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0013.g013243 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014331 ATERF13, ERF13, EREBP not classified & original description: CDS=134-1000 0.01 OrthoFinder output from all 47 species
Azfi_s0154.g053565 RAP2.6 subgroup ERF-X transcription factor & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0233.g059392 DEAR3 not classified & original description: CDS=1-1401 0.01 OrthoFinder output from all 47 species
Cba_g07845 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Cba_g13420 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32120 ERF-1, ATERF-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78270 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.16G067500.1 tny, Ceric.16G067500 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G028400.1 HRE2, Ceric.19G028400 not classified & original description: pacid=50576636... 0.04 OrthoFinder output from all 47 species
Dac_g28422 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g00708 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08691 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Dcu_g14322 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dcu_g14533 HRE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36822 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g09777 DEAR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g06062 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08401 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ehy_g10951 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g31739 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_08437 RAP2.12 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Gb_12583 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_15517 DEAR3 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Gb_36622 DREB26 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_41020 No alias transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Len_g20241 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Len_g41965 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g46730 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16644 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_168025g0010 ERF110 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Mp5g11100.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18832 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g21529 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g09103 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Nbi_g36821 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40972 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Pir_g04273 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g09341 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g43963 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g65439 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g05946 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33759 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ppi_g00885 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015276 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Sam_g06091 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g44662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g008350.3.1 TINY2, Solyc12g008350 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Spa_g07893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25197 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 45 94
No external refs found!