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  5. GSVIVT01011273001

GSVIVT01011273001


No description available


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011273001

Target Alias Description ECC score Gene Family Method Actions
Adi_g019664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1677.g105663 No alias not classified & original description: CDS=1-795 0.03 OrthoFinder output from all 47 species
Dac_g00828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g01650.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g24819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g078300.2.1 Solyc10g078300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g007110.2.1 Solyc11g007110 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e009475_P001 Zm00001e009475 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001374 R3H_dom 27 73
IPR024771 SUZ 118 167
No external refs found!