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  5. GSVIVT01010627001

GSVIVT01010627001 (ARR1, RR1)


Aliases : ARR1, RR1

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010627001
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00186590 ARR11,... RNA biosynthesis.transcriptional activation.ARR-B... 0.01 OrthoFinder output from all 47 species
AT1G67710 ARR11 response regulator 11 0.05 OrthoFinder output from all 47 species
AT5G58080 RR18, ARR18 response regulator 18 0.03 OrthoFinder output from all 47 species
Aev_g04595 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ala_g37659 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Aob_g20636 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10873 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13806 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g58078 MYBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19909.t1 ARR11, Aspi01Gene19909 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene31778.t2 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50562.t1 Aspi01Gene50562 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene58607.t1 MYBC1, Aspi01Gene58607 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69302.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Cba_g49913 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G035500.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.39G052700.1 MYBC1, Ceric.39G052700 MYB-RELATED transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
GSVIVT01029177001 ARR10, RR10 RNA biosynthesis.transcriptional activation.ARR-B... 0.06 OrthoFinder output from all 47 species
Gb_10394 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Gb_27043 No alias Two-component response regulator ORR22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g22395 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Len_g37967 MYBC1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57707 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_114951g0010 ARR11 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
MA_12161g0010 RR14, ARR14 Two-component response regulator ORR23 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_17547g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_601142g0010 RR2, ARR2 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
MA_92689g0020 RR14, ARR14 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20473 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Pir_g27542 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23834 ARR10, RR10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Solyc12g099380.3.1 ARR1, RR1, Solyc12g099380 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Spa_g51591 ARR10, RR10 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01214 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 24 132
IPR001005 SANT/Myb 214 263
No external refs found!