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Aliases : PP2-A11, AtPP2-A11
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component
Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00203100 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07837 | PP2-A11, AtPP2-A11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g29100 | PP2-A15, AtPP2-A15 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0229.g059124 | No alias | not classified & original description: CDS=133-1170 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0405.g068386 | No alias | not classified & original description: CDS=1-978 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g09552 | MEE66 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14188 | AtPP2-B7, PP2-B7 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g06500.1 | PP2-A1,... | Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g48270.3 | AtPP2-A13,... | component FBX of SCF E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g03740.1 | AtPP2-B10,... | F-box protein PP2-B10 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g14283 | MEE66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g38747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g00553 | MEE66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g008820.3.1 | PP2-A15,... | component FBX of SCF E3 ubiquitin ligase complex | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g083730.2.1 | PP2-A15,... | component FBX of SCF E3 ubiquitin ligase complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000116_P001 | AtPP2-A13,... | component FBX of SCF E3 ubiquitin ligase complex | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e016195_P001 | AtPP2-B1,... | F-box protein PP2-B1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025886 | PP2-like | 63 | 221 |
| No external refs found! |