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  5. GSVIVT01010394001

GSVIVT01010394001 (XYL4, ATBXL4)


Aliases : XYL4, ATBXL4

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010394001
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00125p00113140 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
Gb_39728 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Len_g05441 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_77922g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
MA_99945g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Spa_g08645 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08893 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 170 356
IPR001611 Leu-rich_rpt 507 567
IPR001764 Glyco_hydro_3_N 54 130
No external refs found!