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  5. GSVIVT01010374001

GSVIVT01010374001


Description : U-box domain-containing protein 6 OS=Arabidopsis thaliana


Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010374001

Target Alias Description ECC score Gene Family Method Actions
Adi_g079897 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04833 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22443 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27084 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62287 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g15193 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04138 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g11019 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33424 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30427 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10644 ATPUB45, PUB45 E3 ubiquiTin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028553_P001 ATPUB45, PUB45,... U-box domain-containing protein 45 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 282 350
No external refs found!