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  5. GSVIVT01010299001

GSVIVT01010299001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010299001

Target Alias Description ECC score Gene Family Method Actions
AT1G13195 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene49253.t2 Aspi01Gene49253 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17096 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_28381 No alias RING-HC-class E3 ligase 0.06 OrthoFinder output from all 47 species
Nbi_g01971 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06649 No alias E3 ubiquitin ligase & original description: none 0.07 OrthoFinder output from all 47 species
Solyc05g014250.3.1 Solyc05g014250 RING-HC-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e004460_P001 Zm00001e004460 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e018924_P001 Zm00001e018924 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!