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  5. GSVIVT01010295001

GSVIVT01010295001


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.TNO1 tethering factor


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01010295001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254550 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00049p00185400 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.15 OrthoFinder output from all 47 species
Aev_g30321 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g14350 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22595 No alias vesicle trafficking tethering factor *(TNO1) & original... 0.06 OrthoFinder output from all 47 species
Aop_g69641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59720.t1 Aspi01Gene59720 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053538 No alias not classified & original description: CDS=266-7378 0.03 OrthoFinder output from all 47 species
Ceric.15G031700.1 Ceric.15G031700 not classified & original description: pacid=50639891... 0.05 OrthoFinder output from all 47 species
Dcu_g08332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_40009 No alias TNO1 vesicle trafficking tethering factor 0.08 OrthoFinder output from all 47 species
LOC_Os02g38480.1 LOC_Os02g38480 TNO1 vesicle trafficking tethering factor 0.02 OrthoFinder output from all 47 species
Len_g22993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431592g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10432450g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
MA_156987g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_167448g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_4333439g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp4g21920.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g24585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g014200.3.1 Solyc05g014200 TNO1 vesicle trafficking tethering factor 0.07 OrthoFinder output from all 47 species
Solyc08g006420.3.1 Solyc08g006420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013662_P003 Zm00001e013662 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015026_P001 Zm00001e015026 TNO1 vesicle trafficking tethering factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!