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  5. GSVIVT01009847001

GSVIVT01009847001


Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana


Gene families : OG0004526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009847001

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020801.76 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_16498 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56720.1 LOC_Os04g56720 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g05581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10358489g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g05339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 247 285
IPR000408 Reg_chr_condens 76 125
IPR000408 Reg_chr_condens 185 244
IPR000408 Reg_chr_condens 353 398
IPR000408 Reg_chr_condens 128 174
No external refs found!