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  5. GSVIVT01009815001

GSVIVT01009815001 (AP3, ATAP3)


Aliases : AP3, ATAP3

Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor


Gene families : OG0017046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0017046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009815001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00217560 AP3, ATAP3,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AT3G54340 AP3, ATAP3 K-box region and MADS-box transcription factor family protein 0.05 OrthoFinder output from all 47 species
GSVIVT01018839001 AP3, ATAP3 Floral homeotic protein DEFICIENS OS=Antirrhinum majus 0.03 OrthoFinder output from all 47 species
Zm00001e030187_P001 AP3, ATAP3,... transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 83 168
IPR002100 TF_MADSbox 10 57
No external refs found!