GSVIVT01009801001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009801001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
AT1G01250	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.13	OrthoFinder output from all 47 species
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.02	OrthoFinder output from all 47 species
Adi_g100845	ATERF3, ERF3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g115918	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g31370	RAP2.11	transcription factor *(ERN1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g36635	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Als_g39098	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g46307	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g48568	ERF110	subgroup ERF-X transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g52359	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene09185.t1	RAP2.2, Aspi01Gene09185	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000553	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0096.g043715	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g03083	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g06839	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15964	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.16G026600.1	Ceric.16G026600	subgroup ERF-IV/DREB2 transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.1Z027000.1	ERF110, Ceric.1Z027000	not classified & original description: pacid=50632868...	0.07	OrthoFinder output from all 47 species
Ceric.34G045400.1	DREB2A, DREB2,...	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.35G055900.1	Ceric.35G055900	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g37692	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01035852001	SHN3	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
Gb_09495	RAP2.11	transcription factor (ERF). transcription factor (ERN1)	0.03	OrthoFinder output from all 47 species
Gb_37188	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Gb_38187	No alias	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
LOC_Os02g10760.1	WIN1, SHN1,...	transcription factor (ERF). SHN-type cutin and suberin...	0.04	OrthoFinder output from all 47 species
LOC_Os02g34260.1	Rap2.6L, LOC_Os02g34260	transcription factor (ERF)	0.07	OrthoFinder output from all 47 species
LOC_Os02g34270.1	ERF110, LOC_Os02g34270	Ethylene-responsive transcription factor ERF114...	0.07	OrthoFinder output from all 47 species
LOC_Os06g07030.1	RAP2.9, DEAR5,...	transcription factor (DREB)	0.17	OrthoFinder output from all 47 species
LOC_Os06g40150.1	WIN1, SHN1,...	transcription factor (ERF). SHN-type cutin and suberin...	0.02	OrthoFinder output from all 47 species
LOC_Os08g45110.1	LOC_Os08g45110	transcription factor (DREB)	0.13	OrthoFinder output from all 47 species
Len_g22025	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Lfl_g20776	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g22775	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g30898	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
MA_162045g0010	DREB26	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
MA_17001g0020	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.03	OrthoFinder output from all 47 species
MA_647924g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Nbi_g00546	WIN1, SHN1	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37658	ERF5, ATERF-5, ATERF5	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g33101	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc01g005630.3.1	RAP2.11, Solyc01g005630	transcription factor (ERF). transcription factor (ERN1)	0.04	OrthoFinder output from all 47 species
Solyc02g090790.1.1	RRTF1, Solyc02g090790	transcription factor (ERF)	0.19	OrthoFinder output from all 47 species
Solyc03g116610.3.1	WIN1, SHN1,...	transcription factor (ERF). SHN-type cutin and suberin...	0.03	OrthoFinder output from all 47 species
Solyc03g117130.3.1	Solyc03g117130	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
Solyc04g050750.2.1	Solyc04g050750	transcription factor (DREB)	0.21	OrthoFinder output from all 47 species
Solyc09g091950.1.1	Solyc09g091950	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Solyc12g056980.1.1	RAP2.4, Solyc12g056980	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Tin_g37276	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e003858_P001	Zm00001e003858	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
Zm00001e007351_P001	ERF-6-6, ERF6,...	transcription factor (ERF)	0.11	OrthoFinder output from all 47 species
Zm00001e015326_P001	Zm00001e015326	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e020274_P001	TMO3, CRF2,...	transcription factor (ERF)	0.07	OrthoFinder output from all 47 species
Zm00001e036401_P001	DEAR3, Zm00001e036401	transcription factor (DREB)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	13	62

External Links

No external refs found!

GSVIVT01009801001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation