1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01009695001

GSVIVT01009695001


No description available


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009695001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00074580 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G24300 No alias GYF domain-containing protein 0.11 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.11 OrthoFinder output from all 47 species
Adi_g055823 No alias susceptibility factor *(EXA1) & original description: none 0.1 OrthoFinder output from all 47 species
Aev_g48838 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g09024 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g17669 No alias susceptibility factor *(EXA1) & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g37682 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14645 No alias susceptibility factor *(EXA1) & original description: none 0.09 OrthoFinder output from all 47 species
Als_g22450 No alias susceptibility factor *(EXA1) & original description: none 0.1 OrthoFinder output from all 47 species
Als_g55227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17703 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08149 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70568 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41611.t1 Aspi01Gene41611 susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013373 No alias susceptibility factor *(EXA1) & original description: CDS=1-3141 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013375 No alias not classified & original description: CDS=187-2031 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031617 No alias not classified & original description: CDS=1-4227 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037093 No alias not classified & original description: CDS=389-5539 0.06 OrthoFinder output from all 47 species
Azfi_s0448.g070692 No alias susceptibility factor *(EXA1) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g29387 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G008600.1 Ceric.18G008600 susceptibility factor *(EXA1) & original description:... 0.11 OrthoFinder output from all 47 species
Ceric.18G048100.1 Ceric.18G048100 susceptibility factor *(EXA1) & original description:... 0.11 OrthoFinder output from all 47 species
Ceric.33G057600.1 Ceric.33G057600 susceptibility factor *(EXA1) & original description:... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.56 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre04.g225350 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g10946 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05846 No alias susceptibility factor *(EXA1) & original description: none 0.15 OrthoFinder output from all 47 species
Dcu_g39021 No alias susceptibility factor *(EXA1) & original description: none 0.12 OrthoFinder output from all 47 species
Dde_g22181 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15753 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g21462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g69990.1 LOC_Os01g69990 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.1 OrthoFinder output from all 47 species
Len_g20603 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g54503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04295 No alias susceptibility factor *(EXA1) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g07445 No alias susceptibility factor *(EXA1) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g16227 No alias susceptibility factor *(EXA1) & original description: none 0.1 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
MA_10117g0040 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10425836g0010 No alias susceptibility factor (EXA1) 0.18 OrthoFinder output from all 47 species
MA_10425836g0020 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp8g07340.1 No alias susceptibility factor (EXA1) 0.07 OrthoFinder output from all 47 species
Msp_g20541 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03874 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06775 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g23409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16659 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_13780V3.1 Pp3c12_13780 GYF domain-containing protein 0.02 OrthoFinder output from all 47 species
Ppi_g54992 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014813 No alias susceptibility factor *(EXA1) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024075 No alias susceptibility factor *(EXA1) & original description: CDS=1-5616 0.08 OrthoFinder output from all 47 species
Sam_g11581 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g24517 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo438556 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo438614 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc04g080240.4.1 Solyc04g080240 susceptibility factor (EXA1) 0.08 OrthoFinder output from all 47 species
Solyc05g015920.3.1 Solyc05g015920 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc05g015930.4.1 Solyc05g015930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08452 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30700 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g46291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08422 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35687 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Zm00001e032780_P001 Zm00001e032780 susceptibility factor (EXA1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 591 628
No external refs found!